Example single fit ================== Fitting method - Read data - Select and create model - Fit the data with model - Save plots and log Quick fit --------- .. code:: ipython3 import src.binary_sed_fitting as bsf ################################################################################ name = 'WOCS2002' file_name = 'data/extinction_corrected_flux_files/%s.csv'%name data = bsf.load_data(file_name, mode='csv') distance = 831. # pc e_distance = 11. # pc ################################################################################ model_name = 'kurucz' limits = {'Te' : [3500, 9000], 'logg' : [ 3, 5], 'MH' : [ 0.0, 0.0], 'alpha': [ 0.0, 0.0]} model = bsf.Model(model_name, limits=limits) ################################################################################ star = bsf.Star(name=name, distance=distance, e_distance=e_distance, data=data, model=model) ################################################################################ star.fit_chi2() star.plot() .. parsed-literal:: 22:39:52 ----- WARNING ----- estimate_runtime Calculating chi2: ETA ~ 0 s .. image:: examples_single/output_3_1.png Selecting model --------------- - Supported models: Kurucz, Koester and Kurucz_UVBLUE .. code:: ipython3 import src.binary_sed_fitting as bsf ################################################################################ model_name = 'kurucz' limits = {'Te' : [3500, 9000], 'logg' : [ 3, 5], 'MH' : [ 0.0, 0.0], 'alpha': [ 0.0, 0.0]} model = bsf.Model(model_name, limits=limits) print(model_name, '\n\n\n' ,model.da) ################################################################################ model_name = 'kurucz_uvblue' limits = {'Te' : [3500, 9000], 'logg' : [ 3, 5], 'MH' : [ 0.0, 0.0]} model = bsf.Model(model_name, limits=limits) print(model_name, '\n\n\n' ,model.da) ################################################################################ model_name = 'koester' limits = {'Te' : [5000, 80000], 'logg' : [ 6.5, 9.5]} model = bsf.Model(model_name, limits=limits) print(model_name, '\n\n\n' ,model.da) .. parsed-literal:: kurucz Size: 8MB [938630 values with dtype=float64] Coordinates: * FilterID (FilterID) Size: 4MB [489720 values with dtype=float64] Coordinates: * FilterID (FilterID) Size: 70MB [8700692 values with dtype=float64] Coordinates: * FilterID (FilterID) .txt`` - The summary logs are chi2 dataframe is saved in ``outputs\log_single_fitting.csv`` and ``outputs\log_starsystem_fitting.csv``. .. code:: ipython3 import src.binary_sed_fitting as bsf import warnings import importlib warnings.filterwarnings("ignore") importlib.reload(bsf) bsf.console.setLevel(bsf.logging.INFO) ################################################################################ name = 'WOCS2002' file_name = 'data/extinction_corrected_flux_files/%s.csv'%name data = bsf.load_data(file_name, mode='csv') distance = 831. # pc e_distance = 11. # pc refit = False ################################################################################ model_name = 'kurucz' limits = {'Te' : [3500, 9000], 'logg' : [ 3, 5], 'MH' : [ 0.0, 0.0], 'alpha': [ 0.0, 0.0]} model = bsf.Model(model_name, limits=limits) ################################################################################ star = bsf.Star(name=name, distance=distance, e_distance=e_distance, filters_to_drop=['KPNO/Mosaic.I'], wavelength_range=[3000, 1_000_000_000], data=data, model=model, r_limits='blackbody', run_name='kur', component='A') ################################################################################ star.fit_blackbody(p0=[5000., -20], plot=True, show_plot=True, folder=None) ################################################################################ star.fit_chi2(refit=refit, _trim=1000) star.fit_noisy_chi2(refit=refit, total_iterations=100) ################################################################################ star.plot(add_noisy_seds=False, show_plot=True, folder=None, FR_cutoff=0.5) star.plot_public(add_noisy_seds=False, show_plot=True, folder=None, FR_cutoff=0.5) .. parsed-literal:: 22:39:59 ----- INFO ----- __init__ ========================================================== ---------------------------------------------------------- ------------ WOCS2002 A ------------ ---------------------------------------------------------- ========================================================== 22:39:59 ----- INFO ----- drop_filters Fitted Not fitted wavelength 1481.000000 Astrosat/UVIT.F148W 1541.000000 Astrosat/UVIT.F154W 1608.000000 Astrosat/UVIT.F169M 2303.366368 GALEX/GALEX.NUV 4357.276538 KPNO/Mosaic.B 5035.750275 GAIA/GAIA3.Gbp 5366.240786 KPNO/Mosaic.V 5822.388714 GAIA/GAIA3.G 7619.959993 GAIA/GAIA3.Grp 8101.609574 KPNO/Mosaic.I 8578.159519 GAIA/GAIA3.Grvs 12350.000000 2MASS/2MASS.J 16620.000000 2MASS/2MASS.H 21590.000000 2MASS/2MASS.Ks 33526.000000 WISE/WISE.W1 46028.000000 WISE/WISE.W2 115608.000000 WISE/WISE.W3 22:39:59 ----- INFO ----- drop_filters Filters: used/all = 12/17 22:39:59 ----- INFO ----- blackbody Fit parameters: T=5141 K, log_sf=-19.68 22:39:59 ----- INFO ----- blackbody Fit parameters: T=5141 K, log_sf=-19.68 22:39:59 ----- WARNING ----- calculate_chi2 Give "refit=True" if you want to rerun the fitting process. 22:39:59 ----- INFO ----- calculate_chi2 Te logg MH alpha sf chi2 R L 0 5250 4.0 0.0 0.0 2.105389e-20 42.148650 5.348053 19.575928 1 5250 4.5 0.0 0.0 2.105389e-20 43.750774 5.348053 19.575928 2 5250 3.5 0.0 0.0 2.105389e-20 46.564792 5.348053 19.575928 3 5250 5.0 0.0 0.0 2.105389e-20 51.654370 5.348053 19.575928 4 5250 3.0 0.0 0.0 2.105389e-20 60.201435 5.348053 19.575928 22:39:59 ----- INFO ----- get_parameters_from_chi2_minimization Te 5250 logg 4.0 MH 0.0 alpha 0.0 sf 2.1053889442869984e-20 chi2 42.148649603337915 R 5.348053395835723 L 19.57592810070829 vgf2 11.474651537318044 vgfb2 0.8009328529123378 22:39:59 ----- WARNING ----- calculate_noisy_chi2 Give "refit=True" if you want to rerun the fitting process. 22:39:59 ----- INFO ----- calculate_noisy_chi2 Te logg MH alpha sf chi2 R L 0 5250 4.0 0.0 0.0 2.105389e-20 42.148650 5.348053 19.575928 1 5250 4.0 0.0 0.0 2.105389e-20 48.786377 5.348053 19.575928 2 5250 4.5 0.0 0.0 2.105389e-20 58.784976 5.348053 19.575928 3 5250 4.0 0.0 0.0 2.105389e-20 83.279210 5.348053 19.575928 4 5250 4.0 0.0 0.0 2.105389e-20 57.314788 5.348053 19.575928 22:39:59 ----- INFO ----- get_parameters_from_noisy_chi2_minimization Te 5250(-250,+250) logg 4.0(-0.5,+0.5) MH 0.0(-nan,+nan) alpha 0.0(-nan,+nan) sf 2.1053889442869984e-20(-4.792450334089126e-22,+4.904080842726991e-22) R 5.348053395835723(-0.09359116353916891,+0.0940563746344943) L 19.57592810070829(-0.518255617587945,+0.518255617587945) .. image:: examples_single/output_16_1.png .. image:: examples_single/output_16_2.png .. image:: examples_single/output_16_3.png .. code:: ipython3 print(star.data.index) print(star.data_all.index) print(star.data_not_fitted.index) star.data.head() .. parsed-literal:: Index(['KPNO/Mosaic.B', 'GAIA/GAIA3.Gbp', 'KPNO/Mosaic.V', 'GAIA/GAIA3.G', 'GAIA/GAIA3.Grp', 'GAIA/GAIA3.Grvs', '2MASS/2MASS.J', '2MASS/2MASS.H', '2MASS/2MASS.Ks', 'WISE/WISE.W1', 'WISE/WISE.W2', 'WISE/WISE.W3'], dtype='object', name='FilterID') Index(['Astrosat/UVIT.F148W', 'Astrosat/UVIT.F154W', 'Astrosat/UVIT.F169M', 'GALEX/GALEX.NUV', 'KPNO/Mosaic.B', 'GAIA/GAIA3.Gbp', 'KPNO/Mosaic.V', 'GAIA/GAIA3.G', 'GAIA/GAIA3.Grp', 'KPNO/Mosaic.I', 'GAIA/GAIA3.Grvs', '2MASS/2MASS.J', '2MASS/2MASS.H', '2MASS/2MASS.Ks', 'WISE/WISE.W1', 'WISE/WISE.W2', 'WISE/WISE.W3'], dtype='object', name='FilterID') Index(['Astrosat/UVIT.F148W', 'Astrosat/UVIT.F154W', 'Astrosat/UVIT.F169M', 'GALEX/GALEX.NUV', 'KPNO/Mosaic.I'], dtype='object', name='FilterID') .. raw:: html
wavelength flux error error_fraction error_2percent error_10percent log_wavelength log_flux e_log_flux fitted ... chi2_i vgf2_i vgfb2_i model_flux_median residual_flux_median fractional_residual_median ewr_median chi2_i_median vgf2_i_median vgfb2_i_median
FilterID
KPNO/Mosaic.B 4357.276538 9.309407e-14 6.130611e-15 0.065854 6.130611e-15 9.309407e-15 3.639215 -13.031078 0.028600 1 ... 0.545712 0.545712 2.366611e-01 8.856525e-14 4.528824e-15 0.048648 0.738723 0.545712 0.545712 2.366611e-01
GAIA/GAIA3.Gbp 5035.750275 1.028575e-13 3.881303e-16 0.003773 2.057150e-15 1.028575e-14 3.702064 -12.987764 0.001639 1 ... 0.000081 0.000003 1.148069e-07 1.028540e-13 3.485137e-18 0.000034 0.008979 0.000081 0.000003 1.148069e-07
KPNO/Mosaic.V 5366.240786 1.079375e-13 7.108112e-15 0.065854 7.108112e-15 1.079375e-14 3.729670 -12.966827 0.028600 1 ... 0.298089 0.298089 1.292734e-01 1.118184e-13 -3.880853e-15 -0.035955 -0.545975 0.298089 0.298089 1.292734e-01
GAIA/GAIA3.G 5822.388714 9.174216e-14 2.539155e-16 0.002768 1.834843e-15 9.174216e-15 3.765101 -13.037431 0.001202 1 ... 4.897209 0.093784 3.751362e-03 9.230407e-14 -5.619057e-16 -0.006125 -2.212964 4.897209 0.093784 3.751362e-03
GAIA/GAIA3.Grp 7619.959993 7.878734e-14 3.154436e-16 0.004004 1.575747e-15 7.878734e-15 3.881953 -13.103544 0.001739 1 ... 13.712759 0.549535 2.198141e-02 7.995545e-14 -1.168111e-15 -0.014826 -3.703074 13.712759 0.549535 2.198141e-02

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